synapser package provides an interface to Synapse, a collaborative workspace for reproducible data intensive research projects, providing support for:
synapser package lets you communicate with the Synapse platform to create collaborative data analysis projects and access data using the R programming language. Other Synapse clients exist for Python, Java, and the web browser.
synapser is available as a ready-built package for Microsoft Windows and Mac OSX. For Linux systems, it is available to install from source. Please also check out our System Dependencies article for instructions on how to install system dependencies on Linux environments.
Alternatively, edit your
~/.Rprofile and configure your default repositories:
after which you may run
install.packages without specifying the repositories:
If you have been asked to validate a release candidate, please use:
To get started, try logging into Synapse. If you don’t already have a Synapse account, register here:
Please visit the
synapser docs site or view our vignettes for using the